The detailed information of tRNA gene sequence


Sequence ID>SRA1000017
Genome IDSRR000282.3070
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 112
End posion on genome 36
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgacattgca
tRNA gene sequence 
GGGGGCGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGACGGTTGGGAGTTCGAA
TCTCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tttcttcctt
Secondary structure (Cloverleaf model)
>SRA1000017	Trp	CCA
                   a      GCCA tttcttcctt
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      A A C        A      | + | | |     G
    T       C T T G       G G G A G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     CGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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