The detailed information of tRNA gene sequence


Sequence ID>SRA1000018
Genome IDSRR000282.5367
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 10
End posion on genome 86
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ncgcgccagt
tRNA gene sequence 
GCCGCCTTAGCTCAGTTGGTTAGAGCGCTTGATTGTGGATCAAGAGGTCCCCCGTTCGAG
CCGGGGAGGTGGTACCA
Downstream region at tRNA end position 
tcccttactt
Secondary structure (Cloverleaf model)
>SRA1000018	His	GTG
                   t      ACCA tcccttactt
                     G + T
                     C - G
                     C - G
                     G + T
                     C - G
                     C - G
                     T - A          C G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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