The detailed information of tRNA gene sequence


Sequence ID>SRA1000022
Genome IDSRR000282.9601
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 22
End posion on genome 110
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actcgccaaT
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGCTGAAGGAGCTGGTTTCGAAAACCAGTGTGCGCATTAGCGTA
CCGGGGGTTCGAATCCCCCCCTCTCCGTta
Downstream region at tRNA end position 
cannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000022	Ser	CGA
                   T      GTta cannnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTGCGCATTAGCGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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