The detailed information of tRNA gene sequence


Sequence ID>SRA1000031
Genome IDSRR000283.16186
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 81
End posion on genome 6
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnncatatgt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCAGTTCGATC
CTGCTTAGCTCCACCA
Downstream region at tRNA end position 
ctttannnnn
Secondary structure (Cloverleaf model)
>SRA1000031	Ala	TGC
                   t      ACCA ctttannnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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