The detailed information of tRNA gene sequence


Sequence ID>SRA1000033
Genome IDSRR000283.29206
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 18
End posion on genome 91
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ccctcacccc
tRNA gene sequence 
GGGCGGGTAGCTCAGTTGGAAGAGCGCCTGTGTCACATGCAGGAGGCCGGTGGTTCGAGA
CCACCCCCGCCCACtg
Downstream region at tRNA end position 
agcaagagtc
Secondary structure (Cloverleaf model)
>SRA1000033	Val	CAC
                   c      ACtg agcaagagtc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          A G
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    T + G
                  G       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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