The detailed information of tRNA gene sequence


Sequence ID>SRA1000038
Genome IDSRR000284.13783
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 25
End posion on genome 101
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
aaaagtttat
tRNA gene sequence
GCGCCCTTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCAAACGTTCGAA
TCGTTTAGGGCGTGCCA
Downstream region at tRNA end position
ttttgtggnn
Secondary structure (Cloverleaf model)
>SRA1000038	Arg	TCT
                   t      GCCA ttttgtggnn
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T T T G C     A
      C G A        A      | | | | |     G
    T       C T C G       A A A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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