The detailed information of tRNA gene sequence


Sequence ID>SRA1000044
Genome IDSRR000284.28670
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 85
End posion on genome 10
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttgcgctgat
tRNA gene sequence 
GCGCCTCTAGCTCAATTGGCAGAGCAACTGACTCTTAATCAGTGGGTTCCGGGTTCAAGT
CCCGGGGGGCGTACCA
Downstream region at tRNA end position 
agtaaacacn
Secondary structure (Cloverleaf model)
>SRA1000044	Lys	CTT
                   t      ACCA agtaaacacn
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G G C C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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