The detailed information of tRNA gene sequence


Sequence ID>SRA1000048
Genome IDSRR000284.38852
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 105
End posion on genome 31
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
cgaaaaatat
tRNA gene sequence
GGCCCGTTCGTCTATCGGTTAGGACGCCAGGTTTTCATCCTGGAAAGAGGGGTTCGACTC
CCCTACGGGCTACAA
Downstream region at tRNA end position
attaattttt
Secondary structure (Cloverleaf model)
>SRA1000048	Glu	TTC
                   t      ACAA attaattttt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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