The detailed information of tRNA gene sequence


Sequence ID>SRA1000057
Genome IDSRR000285.5643
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 4
End posion on genome 78
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnaat
tRNA gene sequence 
GCCTGGGTGGTGTAACGGTTAGCACGAAAGTTTGTGGAACTTTAAGTTTGAGTTCGATTC
TCAGCCCGGGTACCA
Downstream region at tRNA end position 
aaannnnnnn
Secondary structure (Cloverleaf model)
>SRA1000057	His	GTG
                   t      ACCA aaannnnnnn
                     G + T
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C
                     G - C          T T
                    T     G A C T C     A
      C A A        G      + | | | |     G
    G       T G T G       T T G A G     C
    G       + | | |                 T T
    T       G C A C
      T A          G     AAGT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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