The detailed information of tRNA gene sequence


Sequence ID>SRA1000068
Genome IDSRR000285.32553
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 26
End posion on genome 102
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcggacccat
tRNA gene sequence 
TCCGGAGTAGCTCAGTTGGTAGAGCAGGCGGCTGTTAACCGCCGGGCCGGGGGGTTCGAG
TCCCTCCTCCGGAGCCA
Downstream region at tRNA end position 
gcatnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000068	Asn	GTT
                   t      GCCA gcatnnnnnn
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCCG
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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