The detailed information of tRNA gene sequence


Sequence ID>SRA1000078
Genome IDSRR000286.10214
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 85
End posion on genome 10
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttaagcattc
tRNA gene sequence 
GGGTGCTTAGCTCAGTTGGTAGAGCGTCGCCCTTACAAGGCGAATGTCGGCGGTTCGACC
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
tgtatagggn
Secondary structure (Cloverleaf model)
>SRA1000078	Val	TAC
                   c      ACCA tgtatagggn
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C C
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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