The detailed information of tRNA gene sequence


Sequence ID>SRA1000080
Genome IDSRR000286.12669
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 98
End posion on genome 14
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cctctttttc
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTTCGGA
GGTTCGAATCCTCCCCCCTCCACCA
Downstream region at tRNA end position 
tttataacct
Secondary structure (Cloverleaf model)
>SRA1000080	Tyr	GTA
                   c      ACCA tttataacct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G G A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCAGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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