The detailed information of tRNA gene sequence


Sequence ID>SRA1000082
Genome IDSRR000286.18540
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 105
End posion on genome 32
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggtcacccta
tRNA gene sequence 
GGGGGCGTAGTGTAGTGGTTAACACGTCGGCCTGTCAAGCCGAAGATCGCGGGTTCGACC
CCCGTCGCTCCCGCtc
Downstream region at tRNA end position 
gcgaaccgta
Secondary structure (Cloverleaf model)
>SRA1000082	Asp	GTC
                   a      GCtc gcgaaccgta
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | |                 T T
    T       A C A C
      T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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