The detailed information of tRNA gene sequence


Sequence ID>SRA1000106
Genome IDSRR000287.37321
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 108
End posion on genome 33
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
nnnnnnnnnt
tRNA gene sequence
GTCCCCATCGTCTAGAGGCCTAGGACACTGCCCTTTCACGGCGGCAACAGGGGTTCGAAT
CCCCTTGGGGACGCCA
Downstream region at tRNA end position
acttaatctt
Secondary structure (Cloverleaf model)
>SRA1000106	Glu	TTC
                   t      GCCA acttaatctt
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAAC
                    C - G
                    T + G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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