The detailed information of tRNA gene sequence


Sequence ID>W1911709190
Genome IDQPHM01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloplanus salinus JCM 18368 [QPHM]
Start position on genome 162592
End posion on genome 162519
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcgactgcag
tRNA gene sequence 
GCCGACGTGTTGTAATTCGGCGATCATACGGTCCTGTCACGGCCGTGATCCGGGTTCAAA
TCCCGGCGTCGGCGtgg
Downstream region at tRNA end position 
acgcgtggtg
Secondary structure (Cloverleaf model)
>W1911709190	Asp	GTC
                   g      Gtgg acgcgtggtg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T T A A        G      | | | | |     A
  C         T G T T       C C G G G     C
  G           | |                   T T
  G         T C A T
    C G A          A     TGAT
                    C - G
                    G - C
                    G - C
                    T + G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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