The detailed information of tRNA gene sequence


Sequence ID>W1911709192
Genome IDQPHM01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloplanus salinus JCM 18368 [QPHM]
Start position on genome 162017
End posion on genome 161932
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctcaccgcgt
tRNA gene sequence 
GGCGGGGTTTCCCTACCCGGCCAAGGGACCGCGTTGGAAGCGCGGCGTCCGCAAGGGCAC
GAGTGTTCGAATCACTCTCCCGCCGCtg
Downstream region at tRNA end position 
cgtgccgaag
Secondary structure (Cloverleaf model)
>W1911709192	Ser	GGA
                   t      GCtg cgtgccgaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C A C     A
    C C A T        T      | | | | |     G
  C         C C C T       G A G T G     C
  G           | | +                 T T
  G         A G G G
    C C A          A     CGTCCGCAAGGGCAC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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