The detailed information of tRNA gene sequence


Sequence ID>SRA1000107
Genome IDSRR000287.38303
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 16
End posion on genome 91
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctacggttat
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCGGCAGTTCAAAT
CTGCTTCTGGGCTCCA
Downstream region at tRNA end position 
gttttggttg
Secondary structure (Cloverleaf model)
>SRA1000107	Thr	GGT
                   t      TCCA gttttggttg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     T C G T C     A
      T G A        A      + | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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