The detailed information of tRNA gene sequence


Sequence ID>SRA1000111
Genome IDSRR000287.44513
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 10
End posion on genome 84
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position
natgacgcaa
tRNA gene sequence
TCCGCCTTGGTGTAACGGCAGCACGACAGCCTTTGGAGCTGTTAGGTCTAGGTTCGAATC
CTGGGGGCGGAGCCA
Downstream region at tRNA end position
atttttaact
Secondary structure (Cloverleaf model)
>SRA1000111	Gln	TTG
                   a      GCCA atttttaact
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G          T A
                    T     G G T C C     A
        A A        G      | + | | |     G
      C     T G T G       C T A G G     C
      G     + | | |                 T T
      G     G C A C
        C A        G     TAGGT
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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