The detailed information of tRNA gene sequence


Sequence ID>W1911709840
Genome IDQPLV01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum sp. Atlit-8R [QPLV]
Start position on genome 238720
End posion on genome 238646
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctgtcggaca
tRNA gene sequence 
GGGTCGATAGCTCAGCTCGGCCAGAGCTGCTGGTTCCAGACCAGCGTGACGGGGGTTCGA
ATCCTTCTCGACCCAtct
Downstream region at tRNA end position 
cccgacggcg
Secondary structure (Cloverleaf model)
>W1911709840	Trp	CCA
                   a      Atct cccgacggcg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T          T A
                    T     C T T C C     A
    T C G A        A      | + + | |     G
  C         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          T     GTGAC
                    G - C
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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