The detailed information of tRNA gene sequence


Sequence ID>SRA1000117
Genome IDSRR000288.4071
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 4
End posion on genome 78
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnata
tRNA gene sequence 
TGTCCGTTCGTCTATCGGTTAGGACGTCAGGTTTTCAACCTGAAAAGAGGAGTTCGATTC
TCCTACGGGATACCA
Downstream region at tRNA end position 
aacaaggaag
Secondary structure (Cloverleaf model)
>SRA1000117	Glu	TTC
                   a      ACCA aacaaggaag
                     T   T
                     G   A
                     T + G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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