The detailed information of tRNA gene sequence


Sequence ID>SRA1000129
Genome IDSRR000288.20127
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 84
End posion on genome 13
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ncctctgcct
tRNA gene sequence 
GCCGCCGTAGTTCAATGGATAGAACGAGCNCCTCCTAAGCGCTAGATACAGGTTCGATTC
CTGTCGGAGGCCncc
Downstream region at tRNA end position 
ctgagacagn
Secondary structure (Cloverleaf model)
>SRA1000129	Arg	CCT
                   t      Cncc ctgagacagn
                     G - C
                     C - G
                     C - G
                     G   A
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AGAT
                    A - T
                    G - C
                    C - G
                    N   C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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