The detailed information of tRNA gene sequence


Sequence ID>SRA1000130
Genome IDSRR000288.25086
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 30
End posion on genome 116
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tacttggacT
tRNA gene sequence 
GGGAGTGTGGCGGAATCGGTAGACGCACCAGACTTAAAATCTGTTGAGAATTAATCTCGT
GGGGGTTCAAGTCCCCCCACTCCTANnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000130	Leu	TAA
                   T      ANnn nnnnnnnnnn
                     G + T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    C       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     TGAGAATTAATCTCGT
                    C   T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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