The detailed information of tRNA gene sequence


Sequence ID>SRA1000131
Genome IDSRR000288.29653
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 20
End posion on genome 95
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccgagcaga
tRNA gene sequence 
GGCCCCGTCGTCTAGAGGCCTAGGACGCTGCCCTCTCAAGGCAGAAACGCCGGTTCAAAT
CCGGTCGGGGCTGCTA
Downstream region at tRNA end position 
atcagatatt
Secondary structure (Cloverleaf model)
>SRA1000131	Glu	CTC
                   a      GCTA atcagatatt
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      A G A        C      + | | | |     A
    G       T C T G       G C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     AAAC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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