The detailed information of tRNA gene sequence


Sequence ID>SRA1000135
Genome IDSRR000288.46328
Search identical group
Phylum/ClassBacterial carbon processing by generalist species in the coastal ocean. (SRP000056)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtactccatt
tRNA gene sequence 
CGGAGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position 
gcatttatag
Secondary structure (Cloverleaf model)
>SRA1000135	Pro	TGG
                   t      ACCA gcatttatag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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