The detailed information of tRNA gene sequence


Sequence ID>SRA1000166
Genome IDSRR001036.218364
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 108
End posion on genome 32
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnntgtg
tRNA gene sequence 
GCGACCATAGCTCAGTTGGTTAGAGCGCCGGTTTGTGGTACCGGAGGTCGCGGGTTCGAG
CCCCGTTGGTCGCCCCA
Downstream region at tRNA end position 
ttttctctat
Secondary structure (Cloverleaf model)
>SRA1000166	His	GTG
                   g      CCCA ttttctctat
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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