The detailed information of tRNA gene sequence


Sequence ID>SRA1000187
Genome IDSRR001036.299297
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 110
End posion on genome 20
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
gccctttggc
Secondary structure (Cloverleaf model)
>SRA1000187	Ser	GGA
                   c      GCCA gccctttggc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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