The detailed information of tRNA gene sequence


Sequence ID>SRA1000238
Genome IDSRR001037.230873
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 99
End posion on genome 24
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actccggcct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTAAGTTCGAGT
CTTACTGCCCCTGCCA
Downstream region at tRNA end position 
gccggcccat
Secondary structure (Cloverleaf model)
>SRA1000238	Trp	CCA
                   t      GCCA gccggcccat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C A T T C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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