The detailed information of tRNA gene sequence


Sequence ID>SRA1000240
Genome IDSRR001037.239803
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 109
End posion on genome 33
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnttgtg
tRNA gene sequence 
GCGACCATAGCTCAGTTGGTTAGAGCGCCGGTTTGTGGTACCGGAGGTCGCGGGTTCGAG
CCCCGTTGGTCGCCCCA
Downstream region at tRNA end position 
tttttctcta
Secondary structure (Cloverleaf model)
>SRA1000240	His	GTG
                   g      CCCA tttttctcta
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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