The detailed information of tRNA gene sequence


Sequence ID>SRA1000241
Genome IDSRR001037.243177
Search identical group
Phylum/ClassMarine Viruses from Arctic Ocean (SRP000129)
Species
Start position on genome 84
End posion on genome 10
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcaaaaggg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTAGAGCCGGCCGCTCATAACGGCTAGGTTGCGGGTTCGAGTC
CTGCCGGGCCCACCA
Downstream region at tRNA end position 
cttccttccn
Secondary structure (Cloverleaf model)
>SRA1000241	Met	CAT
                   g      ACCA cttccttccn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
        A A        A      | | + | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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