The detailed information of tRNA gene sequence


Sequence ID>SRA1000258
Genome IDSRR001038.5905
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 6
End posion on genome 79
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnttgat
tRNA gene sequence 
GCCAACTTAGCTCAGCTGGATAGAGCAGGGTTTTTGTAAAGCTCAGGTCATCGGTTCAAG
TCCGATAGTTGGCTtat
Downstream region at tRNA end position 
taggaggatt
Secondary structure (Cloverleaf model)
>SRA1000258	Thr	TGT
                   t      Ttat taggaggatt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     C - G
                     T - A          T G
                    T     T A G C C     A
      C G A        A      | | | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    G - C
                    G + T
                    G - C
                    T + G
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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