The detailed information of tRNA gene sequence


Sequence ID>SRA1000278
Genome IDSRR001038.223542
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
naataagtag
tRNA gene sequence 
GCGCTCGTAGCTCAGTTGGATAGAGCATCTGCCTTCTAAGCAGACGGTCACAGGTTCGAA
TCCTGTCGGGCGTACAA
Downstream region at tRNA end position 
attaaaatac
Secondary structure (Cloverleaf model)
>SRA1000278	Arg	TCT
                   g      ACAA attaaaatac
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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