The detailed information of tRNA gene sequence


Sequence ID>SRA1000287
Genome IDSRR001038.295834
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 92
End posion on genome 18
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
tctccgccat
tRNA gene sequence 
GCGCCTGTAGCTTAACTGGATAGAGCATCTGATTACGGATCAGAAGGTTGGGGGTTCGAC
TCCCTCCAGGCGTGCtt
Downstream region at tRNA end position 
ataanttttt
Secondary structure (Cloverleaf model)
>SRA1000287	Arg	ACG
                   t      GCtt ataanttttt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       T T C G       G G G G G     C
    G       + | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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