The detailed information of tRNA gene sequence


Sequence ID>SRA1000293
Genome IDSRR001038.350625
Search identical group
Phylum/ClassMarine Viruses from Sargasso Sea (SRP000130)
Species
Start position on genome 93
End posion on genome 19
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgatcttctc
tRNA gene sequence 
CGCGGAGTAGCCAAGTGGTAAGGCGGGAGACTGCAAATCTCTTATTCGTCGGTTCGATTC
CGACCTCCGCGTCCA
Downstream region at tRNA end position 
agggttggta
Secondary structure (Cloverleaf model)
>SRA1000293	Cys	GCA
                   c      TCCA agggttggta
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     C A G C C     A
        G A        A      | | | | |     G
      T     A C C G       G T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATTC
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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