The detailed information of tRNA gene sequence


Sequence ID>SRA1000311
Genome IDSRR001039.127851
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Kingman Atoll (SRP000131)
Species
Start position on genome 111
End posion on genome 27
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ngattttaag
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTAAATGCAACGGACTGTAACTCCGTCGGGGCAACCCTACATA
GGTTCGAATCCTATCCCCTCCACCA
Downstream region at tRNA end position 
tattttgatt
Secondary structure (Cloverleaf model)
>SRA1000311	Tyr	GTA
                   g      ACCA tattttgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     G
    G       G A C G       A T A G G     C
    G         | | |                 T T
    T       A T G C
      A A          A     CGGGGCAACCCTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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