The detailed information of tRNA gene sequence


Sequence ID>SRA1000328
Genome IDSRR001040.60965
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Kingman Atoll (SRP000132)
Species
Start position on genome 86
End posion on genome 2
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttctaaatt
tRNA gene sequence 
GGAAGGTTGGCAGAGCGGTAATGCAGCACCTTGGAAAGGTGTCGTCGGTAACGGCGCGGG
GGTTCGATTCCCTCACCTTCCGCCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000328	Ser	GGA
                   t      GCCA annnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      C     G A C G       G G G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CGTCGGTAACGGCGC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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