The detailed information of tRNA gene sequence


Sequence ID>SRA1000330
Genome IDSRR001040.79427
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Kingman Atoll (SRP000132)
Species
Start position on genome 19
End posion on genome 93
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
agtattataa
tRNA gene sequence 
GCTGCCGTAGCTCAGGGGTAGAGCACTCCCTTGGTAAGGGAGAGGCCGAGAGTTCAAATC
TCTCCGGCAGCACCA
Downstream region at tRNA end position 
atttgaaaat
Secondary structure (Cloverleaf model)
>SRA1000330	Thr	GGT
                   a      ACCA atttgaaaat
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C T C T C     A
        G A        A      | | | | |     A
      G     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGCC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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