The detailed information of tRNA gene sequence


Sequence ID>SRA1000334
Genome IDSRR001040.105433
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Kingman Atoll (SRP000132)
Species
Start position on genome 108
End posion on genome 23
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
nnnnnnnnta
tRNA gene sequence
GCCGGAGTGGCGGAATTGGTAGACGCGTTCGATTCAAAATCGAGTGCCCACAAGGCGTGA
GAGTTCGAGTCTCTCCTCCGGCACCA
Downstream region at tRNA end position
aaggagaagt
Secondary structure (Cloverleaf model)
>SRA1000334	Leu	CAA
                   a      ACCA aaggagaagt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCCACAAGGCGT
                    T + G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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