The detailed information of tRNA gene sequence


Sequence ID>SRA1000342
Genome IDSRR001041.55345
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 11
End posion on genome 85
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cggcgggaac
tRNA gene sequence 
GGGCGATTAGCTCAGCGGTAGAGCACTTCGTTGACATCGAAGGGGTCACTGGTTCGATCC
CAGTATCGCCCACCA
Downstream region at tRNA end position 
tgaaccgccg
Secondary structure (Cloverleaf model)
>SRA1000342	Val	GAC
                   c      ACCA tgaaccgccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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