The detailed information of tRNA gene sequence


Sequence ID>SRA1000349
Genome IDSRR001041.176137
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 31
End posion on genome 103
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
tctcaagcaa
tRNA gene sequence 
GTTTTCGTGGTGTAGCGGTTATCACATCTGTCTAACACACAGAAGGTCCCCGGTTCGATC
CCGGGCGAAAACAgtt
Downstream region at tRNA end position 
tttgaccnnn
Secondary structure (Cloverleaf model)
>SRA1000349	Val	AAC
                   a      Agtt tttgaccnnn
                     G - C
                     T - A
                     T - A
                     T - A
                     T - A
                     C - G
                     G - C          C T
                    T     G G G C C     A
      C G A        G      | | | | |     G
    G       T G T G       C C C G G     C
    G         | | |                 T T
    T       T C A C
      T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  C       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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