The detailed information of tRNA gene sequence


Sequence ID>SRA1000350
Genome IDSRR001041.179929
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 21
End posion on genome 95
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
ctggcaccct
tRNA gene sequence 
GGCGCCGTGGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCGCGAGTTCGAA
TCTCGCCGGGGCCTCat
Downstream region at tRNA end position 
tttttttnnt
Secondary structure (Cloverleaf model)
>SRA1000350	Thr	AGT
                   t      TCat tttttttnnt
                     G - C
                     G - C
                     C - G
                     G   G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    T       T T C G       G C G A G     C
    G       | | | |                 T T
    G       A A G C
      T T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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