The detailed information of tRNA gene sequence


Sequence ID>SRA1000353
Genome IDSRR001041.184747
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 3
End posion on genome 86
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
nnnnnnnaaT
tRNA gene sequence 
GACAGCGTGTCCGAGTGGTTAAGGAGATGGACTAGAAATCCATTGGGCTCTGCCCGCGCA
GGTTCGAATCCTGCCGCTGTCGTtt
Downstream region at tRNA end position 
ttcgtgcttg
Secondary structure (Cloverleaf model)
>SRA1000353	Ser	AGA
                   T      GTtt ttcgtgcttg
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C A G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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