The detailed information of tRNA gene sequence


Sequence ID>SRA1000354
Genome IDSRR001041.196300
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 19
End posion on genome 90
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cactcgatac
tRNA gene sequence 
ACGTCCTTGGTGTAACGGCAGCACTGCTGATTCCAAACCAGTAAGTCAGGGTTCAAATCC
TTGGGGACGTGCtg
Downstream region at tRNA end position 
tgataggcnn
Secondary structure (Cloverleaf model)
>SRA1000354	Trp	CCA
                   c      GCtg tgataggcnn
                     A - T
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G          T A
                    T     G T T C C     A
        A A        G      | | + | |     A
      C     T G T G       C A G G G     C
      G     + | | |                 T T
      G     G C A C
        C A        T     AAGT
                    G + T
                    C - G
                    T - A
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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