The detailed information of tRNA gene sequence


Sequence ID>SRA1000356
Genome IDSRR001041.216002
Search identical group
Phylum/ClassLine Islands Corals, microbial fraction of Christmas Atoll (SRP000133)
Species
Start position on genome 28
End posion on genome 100
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actccgcgtg
tRNA gene sequence 
AGCGGAGTGGCGCAGTGGTTAGCGTGTTGGGCTCATAACCCAAAGGTCCGTGGATCGAAA
CAACGCTCCGCTAggn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000356	Met	CAT
                   g      Aggn nnnnnnnnnn
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          A A
                    T     G C A A C     A
      T G A        G      | | |   |     G
    G       C G C G       C G T G G     C
    G       | | | +                 A T
    T       G C G T
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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