The detailed information of tRNA gene sequence


Sequence ID>SRA1000372
Genome IDSRR001042.11351
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 15
End posion on genome 88
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgcaacctat
tRNA gene sequence 
GGCATTGTGGCCGAGTGGCTAGGCGGAGCTCTGCAAAAGCTTTTACAGCGGTTCGAATCC
GCTCGATGCCTCAA
Downstream region at tRNA end position 
ctaaggactt
Secondary structure (Cloverleaf model)
>SRA1000372	Cys	GCA
                   t      TCAA ctaaggactt
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     T + G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        G     TTAC
                    G + T
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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