The detailed information of tRNA gene sequence


Sequence ID>SRA1000376
Genome IDSRR001042.20539
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 12
End posion on genome 84
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgatcccaca
tRNA gene sequence 
GGGGCGGTAGCTCAACTGGGAGAGCACGGCGTTCGCAATGCCGAGGTTGGGAGTTCGATC
CTCCTCCGCTCCAgta
Downstream region at tRNA end position 
ttatagttct
Secondary structure (Cloverleaf model)
>SRA1000376	Ala	CGC
                   a      Agta ttatagttct
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    T     T C C T C     A
      C A A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTT
                    C - G
                    G - C
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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