The detailed information of tRNA gene sequence


Sequence ID>SRA1000379
Genome IDSRR001042.24641
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 37
End posion on genome 112
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aataatttgg
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTAGAGCAATTCCCTTTTAAGGAATGGGTCGATGGTTCGAGT
CCATCAGGGCTCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000379	Lys	TTT
                   g      ACCA nnnnnnnnnn
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C T A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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