The detailed information of tRNA gene sequence


Sequence ID>SRA1000386
Genome IDSRR001042.35488
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 4
End posion on genome 79
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnnnnaat
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGTAGAGCACTCCCCTTTTAAGGGAGTTGTCATGAGTTCGAGC
CTCATCGGGCGTACCA
Downstream region at tRNA end position 
aaagaattga
Secondary structure (Cloverleaf model)
>SRA1000386	Lys	TTT
                   t      ACCA aaagaattga
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     T A C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A T G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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