The detailed information of tRNA gene sequence


Sequence ID>SRA1000387
Genome IDSRR001042.36695
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 13
End posion on genome 95
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cgacatttta
tRNA gene sequence 
GCGGATGTGGCGGAACTGGTAGACGCGCTAGATTTAGGATCTAGTGAGCTTTGCTCGTGG
AGGTTCGAGTCCTCTCATCCGCCnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000387	Leu	TAG
                   a      Cnnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C T C C     A
      C A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGAGCTTTGCTCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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