The detailed information of tRNA gene sequence


Sequence ID>SRA1000396
Genome IDSRR001042.52618
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 28
End posion on genome 104
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
gatacaatac
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTACCTGGCTACGAACCAGGCGGTCGGAGGTTCGAA
TCCTTCCGGGCGCGCCA
Downstream region at tRNA end position 
ttcnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000396	Arg	ACG
                   c      GCCA ttcnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T T C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     CGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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