The detailed information of tRNA gene sequence


Sequence ID>SRA1000401
Genome IDSRR001042.59849
Search identical group
Phylum/ClassLine Islands Corals, viral fraction of Christmas Atoll (SRP000134)
Species
Start position on genome 100
End posion on genome 24
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nngatttttg
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGTTTGTGGTACCGGAGGTCGGGGGTTCAAG
TCCCCTTACTCGCCCCA
Downstream region at tRNA end position 
atttgtgcgc
Secondary structure (Cloverleaf model)
>SRA1000401	His	GTG
                   g      CCCA atttgtgcgc
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G + T          T G
                    T     T C C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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